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Table 1 The binding free energy value of five structural generated complexes calculating by MM/PBSA and MM/GBSA methods (kcal/mol ± SD)

From: Abstracts from the 8th Drug Hypersensitivity Meeting (DHM)

 

Nonapeptide/CBZ

HLA/CBZ

HLA/nonapeptide

HLA + nonapeptide/CBZ

HLA/nonapeptide + CBZ

MM/PBSA

2.42 ± 2.65

1.08 ± 9.27

− 17.98 ± 10.68

− 24.49 ± 11.14

− 4.81 ± 7.25

MM/GBSA

3.62 ± 2.60

0.43 ± 9.25

− 22.11 ± 9.77

− 40.20 ± 9.91

− 15.12 ± 6.90

  1. CBZ: carbamazepine, nonapeptide: FLFDGSPTY, HLA: HLA-B*1502 mutated from PDB code 1XR9